ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wi7A2 - ECOD Domain | ECOD

ECOD/Domains/e6wi7A2

e6wi7A2

UID: 002723473

PDB

Range: A:1001-1103
PDB: 6WI7 chain A(all domains)
UniProt: X6RFN3 (all domains)
Gene: RNF2

Molecule: E3 ubiquitin-protein ligase RING2, Polycomb complex protein BMI-1 chimera

3D Structure

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Related Domains

Browse other domains in zf-C3HC4_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4_2(376.1.1.23)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (HEPES, Glycerin)

HEPESEPE
DrugBank DB16872
GlycerinGOL

Pfam Families

PF13923zf-C3HC4_2

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

ECOD PDB View: 6WI7 RCSB PDB: 6WI7 PDBe: 6WI7 UniProt: X6RFN3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.