ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7cd9A1 - ECOD Domain | ECOD

ECOD/Domains/e7cd9A1

e7cd9A1

UID: 002727726

PDB

Range: A:347-405
PDB: 7CD9 chain A(all domains)
UniProt: Q15047 (all domains)
Gene: SETDB1

Molecule: Histone-lysine N-methyltransferase SETDB1

3D Structure

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Related Domains

Browse other domains in Tudor_4 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_4(4.1.1.128)

Ligands

in contact, ≤ 4 Å

3-methyl-2-[[(3R,5R)-1-methyl-5-(4-phenylmethoxyphenyl)piperidin-3-yl]amino]-5H-pyrrolo[3,2-d]pyrimidin-4-oneFVR

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18358Tudor_4

Histone methyltransferase Tudor domain

ClanCL0010SH3

External Links

ECOD PDB View: 7CD9 RCSB PDB: 7CD9 PDBe: 7CD9 UniProt: Q15047

Downloads

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