ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wkvV1 - ECOD Domain | ECOD

ECOD/Domains/e6wkvV1

e6wkvV1

UID: 002735782

PDB

Range: V:2-258
PDB: 6WKV chain V(all domains)
UniProt: Q9WZP2 (all domains)
Gene: enc

Molecule: Encapsulin

3D Structure

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Related Domains

Browse other domains in Linocin_M18 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupMajor capsid protein gp5(2485.3)

TT-groupMajor capsid protein gp5(2485.3.1)

FFamilyLinocin_M18(2485.3.1.2)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04454Linocin_M18

Encapsulating protein for peroxidase

ClanCL0373Phage-coat

External Links

ECOD PDB View: 6WKV RCSB PDB: 6WKV PDBe: 6WKV UniProt: Q9WZP2

Downloads

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