ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7aizE2 - ECOD Domain | ECOD

ECOD/Domains/e7aizE2

e7aizE2

UID: 002755888

PDB

Range: E:11-176
PDB: 7AIZ chain E(all domains)
UniProt: P16856 (all domains)
Gene: vnfK

Molecule: Nitrogenase vanadium-iron protein beta chain

3D Structure

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Related Domains

Browse other domains in Oxidored_nitro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyOxidored_nitro(2007.1.14.1)

Ligands

in contact, ≤ 4 Å

FE(8)-S(7) CLUSTERCLF
3-HYDROXY-3-CARBOXY-ADIPIC ACIDHCA
Magnesium ionMG

Pfam Families

PF00148Oxidored_nitro

Nitrogenase component 1 type Oxidoreductase

ClanCL0043Chelatase

External Links

ECOD PDB View: 7AIZ RCSB PDB: 7AIZ PDBe: 7AIZ UniProt: P16856

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 2 additives (Tromethamine, 1,2-ETHANEDIOL)

TromethamineTRS
DrugBank DB03754within 5 Å only
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.