ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1iedA1 - ECOD Domain | ECOD

ECOD/Domains/e1iedA1

e1iedA1

UID: 000027560

PDB

Range: A:9-256
PDB: 1IED chain A(all domains)
UniProt: P16753 (all domains)
Gene: UL80

Molecule: Capsid scaffolding protein (Protease precursor) (pPR) [Cleaved into: Assemblin (EC 3.4.21.97) (Protease) (Pr); Assembly protein (AP) (Capsid assembly protein)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_S21 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupHerpes virus serine proteinase, assemblin(50)

HH-groupHerpes virus serine proteinase, assemblin(50.1)

TT-groupHerpes virus serine proteinase, assemblin(50.1.1)

FFamilyPeptidase_S21(50.1.1.1)

Pfam Families

PF00716Peptidase_S21

Assemblin (Peptidase family S21)

ClanCL0201Peptidase_SH

External Links

ECOD PDB View: 1IED RCSB PDB: 1IED PDBe: 1IED UniProt: P16753

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure