ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zu6A2 - ECOD Domain | ECOD

ECOD/Domains/e6zu6A2

e6zu6A2

UID: 002756368

PDB

Range: A:166-339
PDB: 6ZU6 chain A(all domains)
UniProt: P25006 (all domains)
Gene: nirK

Molecule: Copper-containing nitrite reductase

3D Structure

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Related Domains

Browse other domains in Cu-oxidase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupCupredoxin-like(3156)

HH-groupCupredoxin-related(3156.1)

TT-groupCupredoxin-related(3156.1.1)

FFamilyCu-oxidase(3156.1.1.4)

Ligands

in contact, ≤ 4 Å

NitriteNO2
drugDrugBank DB12529

+ 2 additives (Malonate Ion, Sulfate ion)

Malonate IonMLI
DrugBank DB02201

Pfam Families

PF00394Cu-oxidase

Multicopper oxidase

ClanCL0026CU_oxidase

External Links

ECOD PDB View: 6ZU6 RCSB PDB: 6ZU6 PDBe: 6ZU6 UniProt: P25006

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.