ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7a0bA1 - ECOD Domain | ECOD

ECOD/Domains/e7a0bA1

e7a0bA1

UID: 002758459

PDB

Range: A:11-386
PDB: 7A0B chain A(all domains)

Molecule: Queuine tRNA-ribosyltransferase

3D Structure

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Related Domains

Browse other domains in TGT →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTGT(2002.1.1.73)

Ligands

in contact, ≤ 4 Å

(3~{R},4~{R})-1,1-bis(oxidanylidene)thiolane-3,4-diolQTQ
Zinc ionZN
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL

Pfam Families

Queuine tRNA-ribosyltransferase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 7A0B RCSB PDB: 7A0B PDBe: 7A0B

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.