ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7cdeA3 - ECOD Domain | ECOD

ECOD/Domains/e7cdeA3

e7cdeA3

UID: 002759675

PDB

Range: A:640-746
PDB: 7CDE chain A(all domains)

Molecule: Lysine-specific histone demethylase 1A

3D Structure

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Related Domains

Browse other domains in Amino_oxidase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD-linked reductases-C(244.1)

TT-groupFAD-linked reductases-C(244.1.1)

FFamilyAmino_oxidase(244.1.1.6)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01593Amino_oxidase

Flavin containing amine oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7CDE RCSB PDB: 7CDE PDBe: 7CDE

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.