ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7o1sA1 - ECOD Domain | ECOD

ECOD/Domains/e7o1sA1

e7o1sA1

UID: 002765411

PDB

Range: A:1-347
PDB: 7O1S chain A(all domains)

Molecule: [FeFe] hydrogenase maturase subunit HydE

3D Structure

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Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Ligands

in contact, ≤ 4 Å

Carbon monoxideCMO
drugDrugBank DB11588
CysteineCYS
drugDrugBank DB00151
S-adenosyl-L-homocysteine

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 7O1S RCSB PDB: 7O1S PDBe: 7O1S

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB01752

3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATECPS

Cyanide ionCYN

FE2/S2 (INORGANIC) CLUSTERFES

Hydrosulfuric acidH2S

Iodide ionIOD

Iron/sulfur clusterSF4

FE (II) IONFE2

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.