ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7cp5M1 - ECOD Domain | ECOD

ECOD/Domains/e7cp5M1

e7cp5M1

UID: 002770347

PDB

Range: M:1-43
PDB: 7CP5 chain M(all domains)

Molecule: Cytochrome c oxidase subunit 8B, mitochondrial

3D Structure

Loading viewer...

Related Domains

Browse other domains in COX8 →

Classification

AArchitectureextended segments(a.20)

XX-groupMitochondrial cytochrome c oxidase subunit VIIIb (aka IX)(5009)

HH-groupMitochondrial cytochrome c oxidase subunit VIIIb (aka IX)(5009.1)

TT-groupMitochondrial cytochrome c oxidase subunit VIIIb (aka IX)(5009.1.1)

FFamilyCOX8(5009.1.1.1)

Ligands

in contact, ≤ 4 Å

Cholic AcidCHD
drugDrugBank DB02659
Decyl-beta-d-maltopyranosideDMU
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

Pfam Families

Cytochrome oxidase c subunit VIII

External Links

ECOD PDB View: 7CP5 RCSB PDB: 7CP5 PDBe: 7CP5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.