ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7cmeA1 - ECOD Domain | ECOD

ECOD/Domains/e7cmeA1

e7cmeA1

UID: 002776919

PDB

Range: A:101-213
PDB: 7CME chain A(all domains)

Molecule: Cadherin-3

3D Structure

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Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
2-(5-chloro-2-methyl-1H-indol-3-yl)ethan-1-amineG60

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer.

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 7CME RCSB PDB: 7CME PDBe: 7CME

Downloads

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Drug annotations from DrugDomain.