ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7k42B1 - ECOD Domain | ECOD

ECOD/Domains/e7k42B1

e7k42B1

UID: 002778786

PDB

Range: B:1499-1621
PDB: 7K42 chain B(all domains)

Molecule: Transcription initiation factor TFIID subunit 1

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (1,4-Dioxane, Sulfate ion, 1,2-ETHANEDIOL)

1,4-DioxaneDIO
DrugBank DB03316
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 7K42 RCSB PDB: 7K42 PDBe: 7K42

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.