ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7kriB1 - ECOD Domain | ECOD

ECOD/Domains/e7kriB1

e7kriB1

UID: 002779413

PDB

Range: B:-13-113
PDB: 7KRI chain B(all domains)

Molecule: Non-structural protein 9

3D Structure

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Related Domains

Browse other domains in CoV_NSP9 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPhage tail proteins(1.1.13)

FFamilyCoV_NSP9(1.1.13.8)

Ligands

in contact, ≤ 4 Å

1,3-dimethyl-1H-pyrrolo[3,4-d]pyrimidine-2,4(3H,6H)-dioneX0Y

+ 2 additives (Malonate Ion, Sulfate ion)

Malonate IonMLI
DrugBank DB02201
Sulfate ionSO4

Pfam Families

PF08710CoV_NSP9

Coronavirus replicase NSP9

ClanCL0504Phage_barrel

External Links

ECOD PDB View: 7KRI RCSB PDB: 7KRI PDBe: 7KRI

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.