ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7lmyD1 - ECOD Domain | ECOD

ECOD/Domains/e7lmyD1

e7lmyD1

UID: 002780270

PDB

Range: D:467-647,D:743-775
PDB: 7LMY chain D(all domains)

Molecule: Transitional endoplasmic reticulum ATPase

3D Structure

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Related Domains

Browse other domains in AAA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA(2004.1.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal
3-[3-cyclopentylsulfanyl-5-[[3-methyl-4-(4-methylsulfonylphenyl)phenoxy]methyl]-1,2,4-triazol-4-yl]pyridine

Pfam Families

ATPase family associated with various cellular activities (AAA)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7LMY RCSB PDB: 7LMY PDBe: 7LMY

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.