ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7omfD1 - ECOD Domain | ECOD

ECOD/Domains/e7omfD1

e7omfD1

UID: 002784009

PDB

Range: D:6-98
PDB: 7OMF chain D(all domains)

Molecule: PHD finger-like domain-containing protein 5A

3D Structure

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Related Domains

Browse other domains in PHF5 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupPHD finger-like domain-containing protein 5A(377.1.4)

FFamilyPHF5(377.1.4.1)

Ligands

in contact, ≤ 4 Å

Thiocyanate ionSCN
[(~{Z},2~{S})-5-[[4-[(2~{E},4~{E})-3-methyl-5-[(2~{S},4~{R})-4,6,6-trimethyl-4-oxidanyl-oxan-2-yl]penta-2,4-dienyl]cyclohexyl]amino]-5-oxidanylidene-pent-3-en-2-yl] ~{N}-methylcarbamateT2W
Zinc ionZN

Pfam Families

PHF5-like protein

External Links

ECOD PDB View: 7OMF RCSB PDB: 7OMF PDBe: 7OMF

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.