ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xq5B1 - ECOD Domain | ECOD

ECOD/Domains/e6xq5B1

e6xq5B1

UID: 002786131

PDB

Range: B:20-118
PDB: 6XQ5 chain B(all domains)

Molecule: Advanced glycosylation end product-specific receptor

3D Structure

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Related Domains

Browse other domains in Ig_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIg_2(11.1.1.178)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
7-methyl-3-phenyl-1H-indole-2-carboxylic acidV6M

+ 1 additive (Acetate)

AcetateACT

Pfam Families

Immunoglobulin domain

ClanCL0159E-set

External Links

ECOD PDB View: 6XQ5 RCSB PDB: 6XQ5 PDBe: 6XQ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.