ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zzyJ1 - ECOD Domain | ECOD

ECOD/Domains/e6zzyJ1

e6zzyJ1

UID: 002786590

PDB

Range: J:20-60
PDB: 6ZZY chain J(all domains)

Molecule: Photosystem I reaction center subunit IX

3D Structure

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Related Domains

Browse other domains in PSI_PsaJ →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit IX of photosystem I reaction centre, PsaJ(5021)

HH-groupSubunit IX of photosystem I reaction centre, PsaJ(5021.1)

TT-groupSubunit IX of photosystem I reaction centre, PsaJ(5021.1.1)

FFamilyPSI_PsaJ(5021.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Digalactosyl Diacyl Glycerol (Dgdg)

Pfam Families

PF01701PSI_PsaJ

Photosystem I reaction centre subunit IX / PsaJ

External Links

ECOD PDB View: 6ZZY RCSB PDB: 6ZZY PDBe: 6ZZY

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03426

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG

drugDrugBank DB02043

CryptoxanthinRRX

drugDrugBank DB15914

1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE3PH

Tripalmitoylglycerol4RF

(2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoateLPX

PhosphatidylethanolaminePTY

Shown in the structure viewer. Drug annotations from DrugDomain.