ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7dbjB2 - ECOD Domain | ECOD

ECOD/Domains/e7dbjB2

e7dbjB2

UID: 002793237

PDB

Range: B:2-161
PDB: 7DBJ chain B(all domains)

Molecule: L-lactate dehydrogenase B chain

3D Structure

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Related Domains

Browse other domains in Ldh_1_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyLdh_1_N(2003.1.1.2)

Ligands

in contact, ≤ 4 Å

NADHNAI
drugDrugBank DB00157
Oxamic AcidOXM
drugDrugBank DB03940

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF00056Ldh_1_N

lactate/malate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7DBJ RCSB PDB: 7DBJ PDBe: 7DBJ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.