ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dfvB1 - ECOD Domain | ECOD

ECOD/Domains/e1dfvB1

e1dfvB1

UID: 000027973

PDB

Range: B:4-177
PDB: 1DFV chain B(all domains)
UniProt: P80188 (all domains)
Gene: LCN2

Molecule: HUMAN NEUTROPHIL GELATINASE

3D Structure

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Related Domains

Browse other domains in Lipocalin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin(9.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF00061Lipocalin

Lipocalin / cytosolic fatty-acid binding protein family

ClanCL0116Calycin

External Links

ECOD PDB View: 1DFV RCSB PDB: 1DFV PDBe: 1DFV UniProt: P80188

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.