ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7mgwA1 - ECOD Domain | ECOD

ECOD/Domains/e7mgwA1

e7mgwA1

UID: 002797959

PDB

Range: A:79-615
PDB: 7MGW chain A(all domains)

Molecule: Sodium-dependent serotonin transporter

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilySNF(5051.1.1.1)

Ligands

in contact, ≤ 4 Å

CholesterolCLR
drugDrugBank DB04540
SerotoninSRO
drugDrugBank DB08839
Chloride ion

Pfam Families

Sodium:neurotransmitter symporter family

ClanCL0062APC

External Links

ECOD PDB View: 7MGW RCSB PDB: 7MGW PDBe: 7MGW

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DecaneD10

DodecaneD12

HeptaneHP6

PentaneLNK

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.