ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pjaB1 - ECOD Domain | ECOD

ECOD/Domains/e7pjaB1

e7pjaB1

UID: 002802493

PDB

Range: B:344-507
PDB: 7PJA chain B(all domains)

Molecule: YTH domain-containing protein 1

3D Structure

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Related Domains

Browse other domains in YTH →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyYTH(1.1.9.8)

Ligands

in contact, ≤ 4 Å

6-methyl-3H-pyridin-2-one7RE

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

YT521-B-like domain

ClanCL0178PUA

External Links

ECOD PDB View: 7PJA RCSB PDB: 7PJA PDBe: 7PJA

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.