ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pkdI1 - ECOD Domain | ECOD

ECOD/Domains/e7pkdI1

e7pkdI1

UID: 002803019

PDB

Range: I:1-206
PDB: 7PKD chain I(all domains)

Molecule: C-reactive protein

3D Structure

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Related Domains

Browse other domains in Pentaxin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyPentaxin(10.1.1.5)

Ligands

in contact, ≤ 4 Å

N,N,N-Trimethyl-2-(phosphonooxy)ethanaminiumPC
drugDrugBank DB03945
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00354Pentaxin

Pentaxin family

ClanCL0004Concanavalin

External Links

ECOD PDB View: 7PKD RCSB PDB: 7PKD PDBe: 7PKD

Downloads

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