ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7rxvA2 - ECOD Domain | ECOD

ECOD/Domains/e7rxvA2

e7rxvA2

UID: 002806379

PDB

Range: A:125-251
PDB: 7RXV chain A(all domains)

Molecule: S-adenosylmethionine synthase isoform type-2

3D Structure

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Related Domains

Browse other domains in S-AdoMet_synt_M →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupS-adenosylmethionine synthetase(327.17)

TT-groupS-adenosylmethionine synthetase(327.17.1)

FFamilyS-AdoMet_synt_M(327.17.1.3)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175
5'-S-methyl-5'-thioadenosineMTA
drugDrugBank DB02282

Pfam Families

PF02772S-AdoMet_synt_M

S-adenosylmethionine synthetase, central domain

External Links

ECOD PDB View: 7RXV RCSB PDB: 7RXV PDBe: 7RXV

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ion

metal

TrifluoromagnesateMGF

within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.