ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pdeB2 - ECOD Domain | ECOD

ECOD/Domains/e7pdeB2

e7pdeB2

UID: 002813823

PDB

Range: B:28-65,B:205-390
PDB: 7PDE chain B(all domains)

Molecule: Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

3D Structure

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Related Domains

Browse other domains in Arf, G-alpha →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyArf, G-alpha(2004.1.1.431)

Ligands

in contact, ≤ 4 Å

5'-Guanosine-Diphosphate-MonothiophosphateGSP
drugDrugBank DB01864
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

ADP-ribosylation factor family

ClanCL0023P-loop_NTPase

PF00503G-alpha

G-protein alpha subunit

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7PDE RCSB PDB: 7PDE PDBe: 7PDE

Downloads

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