ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7rqb211 - ECOD Domain | ECOD

ECOD/Domains/e7rqb211

e7rqb211

UID: 002826418

PDB

Range: 21:2-98
PDB: 7RQB chain 21(all domains)

Molecule: 50S ribosomal protein L28

3D Structure

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Related Domains

Browse other domains in Ribosomal_L28 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRibosomal protein bL28-related(4232)

HH-groupRibosomal protein bL28-related(4232.1)

TT-groupRibosomal protein L28(4232.1.1)

FFamilyRibosomal_L28(4232.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00830Ribosomal_L28

Ribosomal L28 family

External Links

ECOD PDB View: 7RQB RCSB PDB: 7RQB PDBe: 7RQB

Downloads

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