ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7rqd1T1 - ECOD Domain | ECOD

ECOD/Domains/e7rqd1T1

e7rqd1T1

UID: 002826619

PDB

Range: 1T:1-131
PDB: 7RQD chain 1T(all domains)

Molecule: 50S ribosomal protein L19

3D Structure

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Related Domains

Browse other domains in Ribosomal_L19 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyRibosomal_L19(4.1.1.17)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564within 5 Å only

Shown in the structure viewer.

Pfam Families

PF01245Ribosomal_L19

Ribosomal protein L19

ClanCL0010SH3

External Links

ECOD PDB View: 7RQD RCSB PDB: 7RQD PDBe: 7RQD

Downloads

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Drug annotations from DrugDomain.