ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7rqd211 - ECOD Domain | ECOD

ECOD/Domains/e7rqd211

e7rqd211

UID: 002826638

PDB

Range: 21:2-98
PDB: 7RQD chain 21(all domains)

Molecule: 50S ribosomal protein L28

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L28 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRibosomal protein bL28-related(4232)

HH-groupRibosomal protein bL28-related(4232.1)

TT-groupRibosomal protein L28(4232.1.1)

FFamilyRibosomal_L28(4232.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564within 5 Å only

Shown in the structure viewer.

Pfam Families

PF00830Ribosomal_L28

Ribosomal L28 family

External Links

ECOD PDB View: 7RQD RCSB PDB: 7RQD PDBe: 7RQD

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.