ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7qu5A2 - ECOD Domain | ECOD

ECOD/Domains/e7qu5A2

e7qu5A2

UID: 002831910

PDB

Range: A:128-267
PDB: 7QU5 chain A(all domains)

Molecule: Na(+)-translocating NADH-quinone reductase subunit F

3D Structure

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Related Domains

Browse other domains in FAD_binding_6 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyFAD_binding_6(1.1.7.7)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
gamma-ValerolactoneYVR
Magnesium ionMG

Pfam Families

PF00970FAD_binding_6

Oxidoreductase FAD-binding domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 7QU5 RCSB PDB: 7QU5 PDBe: 7QU5

Downloads

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metal

within 5 Å only

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.