ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7po6B1 - ECOD Domain | ECOD

ECOD/Domains/e7po6B1

e7po6B1

UID: 002833650

PDB

Range: B:343-508
PDB: 7PO6 chain B(all domains)

Molecule: Isoform 2 of YTH domain-containing protein 1

3D Structure

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Related Domains

Browse other domains in YTH →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyYTH(1.1.9.8)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137within 5 Å only

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

YT521-B-like domain

ClanCL0178PUA

External Links

ECOD PDB View: 7PO6 RCSB PDB: 7PO6 PDBe: 7PO6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.