ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7qchA1 - ECOD Domain | ECOD

ECOD/Domains/e7qchA1

e7qchA1

UID: 002833669

PDB

Range: A:61-315
PDB: 7QCH chain A(all domains)

Molecule: Papain-like protease nsp3

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCoV_peptidase(219.1.1.43)

Ligands

in contact, ≤ 4 Å

N-(3,5-dimetoxy-4-hydroxybenzyliden)thiosemicarbazoneA5I
Chloride ionCL
Zinc ionZN

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 7QCH RCSB PDB: 7QCH PDBe: 7QCH

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.