ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1im0A1 - ECOD Domain | ECOD

ECOD/Domains/e1im0A1

e1im0A1

UID: 000028418

PDB

Range: A:13-269
PDB: 1IM0 chain A(all domains)
UniProt: P0A921 (all domains)
Gene: pldA

Molecule: OUTER MEMBRANE PHSOPHOLIPASE A

3D Structure

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Related Domains

Browse other domains in PLA1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupOuter membrane phospholipase A (OMPLA)(5084.4)

TT-groupOuter membrane phospholipase A (OMPLA)(5084.4.1)

FFamilyPLA1(5084.4.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, octyl beta-D-glucopyranoside)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Phospholipase A1

ClanCL0193MBB

External Links

ECOD PDB View: 1IM0 RCSB PDB: 1IM0 PDBe: 1IM0 UniProt: P0A921

Downloads

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