ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7avnB1 - ECOD Domain | ECOD

ECOD/Domains/e7avnB1

e7avnB1

UID: 002843115

PDB

Range: B:1-217
PDB: 7AVN chain B(all domains)

Molecule: Bacteriorhodopsin

3D Structure

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Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

EicosaneLFA
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLB
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 7AVN RCSB PDB: 7AVN PDBe: 7AVN

Downloads

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RetinalRET

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.