ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7m9jB1 - ECOD Domain | ECOD

ECOD/Domains/e7m9jB1

e7m9jB1

UID: 002846607

PDB

Range: B:1-99
PDB: 7M9J chain B(all domains)

Molecule: Protease

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyRVP(1.1.1.3)

Ligands

in contact, ≤ 4 Å

diethyl [(4-{(2S,3R)-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxy-4-[{4-[(1S)-1-hydroxyethyl]benzene-1-sulfonyl}(2-methylpropyl)amino]butyl}phenoxy)methyl]phosphonateYWM

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

Retroviral aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 7M9J RCSB PDB: 7M9J PDBe: 7M9J

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.