ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7mpiAX1 - ECOD Domain | ECOD

ECOD/Domains/e7mpiAX1

e7mpiAX1

UID: 002847101

PDB

Range: AX:22-142
PDB: 7MPI chain AX(all domains)

Molecule: 60S ribosomal protein L25

3D Structure

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Related Domains

Browse other domains in Ribosomal_L23,Ribosomal_L23eN →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal proteins S24e, L23 and L15e(304.109)

TT-groupRibosomal proteins S24e, L23 and L15e(304.109.1)

FFamilyRibosomal_L23,Ribosomal_L23eN(304.109.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00276Ribosomal_L23

Ribosomal protein L23

PF03939Ribosomal_L23eN

Ribosomal protein L23, N-terminal domain

External Links

ECOD PDB View: 7MPI RCSB PDB: 7MPI PDBe: 7MPI

Downloads

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