ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nm0A1 - ECOD Domain | ECOD

ECOD/Domains/e1nm0A1

e1nm0A1

UID: 000028570

PDB

Range: A:4-128,A:185-413
PDB: 1NM0 chain A(all domains)
UniProt: P42321 (all domains)
Gene: katA

Molecule: Catalase

3D Structure

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Related Domains

Browse other domains in Catalase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupBarrel domain in heme-dependent catalases(4028)

HH-groupBarrel domain in heme-dependent catalases(4028.1)

TT-groupBarrel domain in heme-dependent catalases(4028.1.1)

FFamilyCatalase(4028.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267

+ 3 additives (Formic acid, Glycerin, Sulfate ion)

Formic acidFMT
DrugBank DB01942

Pfam Families

PF00199Catalase

Catalase

External Links

ECOD PDB View: 1NM0 RCSB PDB: 1NM0 PDBe: 1NM0 UniProt: P42321

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.