ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7qckA2 - ECOD Domain | ECOD

ECOD/Domains/e7qckA2

e7qckA2

UID: 002857080

PDB

Range: A:61-315
PDB: 7QCK chain A(all domains)

Molecule: Papain-like protease nsp3

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCoV_peptidase(219.1.1.43)

Ligands

in contact, ≤ 4 Å

N-(2,5-dihydroxybenzylidene)-thiosemicarbazoneA7L
Chloride ionCL
Zinc ionZN
metal

+ 2 additives (Phosphate ion, Glycerol)

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 7QCK RCSB PDB: 7QCK PDBe: 7QCK

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4

DrugBank DB14523

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.