ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7rouA1 - ECOD Domain | ECOD

ECOD/Domains/e7rouA1

e7rouA1

UID: 002859493

PDB

Range: A:4-343
PDB: 7ROU chain A(all domains)

Molecule: Tyrosine--tRNA ligase, cytoplasmic

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1b →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1b(2005.1.1.2)

Ligands

in contact, ≤ 4 Å

{(2R,3S,4R,5R)-5-[4-amino-3-(difluoromethoxy)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]-3,4-dihydroxyoxolan-2-yl}methyl [(2S)-2-amino-3-(4-hydroxyphenyl)propanoyl]sulfamate (non-preferred name)66I

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00579tRNA-synt_1b

tRNA synthetases class I (W and Y)

ClanCL0039HUP

External Links

ECOD PDB View: 7ROU RCSB PDB: 7ROU PDBe: 7ROU

Downloads

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Drug annotations from DrugDomain.