ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5sdgB2 - ECOD Domain | ECOD

ECOD/Domains/e5sdgB2

e5sdgB2

UID: 002860624

PDB

Range: B:23-279,B:572-720
PDB: 5SDG chain B(all domains)

Molecule: Asp/Glu-specific dipeptidyl-peptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_S46 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S46(1.1.5.28)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
2-methyl-N-(pyridin-4-yl)furan-3-carboxamideNU4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10459Peptidase_S46

Peptidase S46

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5SDG RCSB PDB: 5SDG PDBe: 5SDG

Downloads

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