ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7tibE3 - ECOD Domain | ECOD

ECOD/Domains/e7tibE3

e7tibE3

UID: 002864062

PDB

Range: E:4-192
PDB: 7TIB chain E(all domains)

Molecule: Replication factor C subunit 5

3D Structure

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Related Domains

Browse other domains in DNA_pol3_delta2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDNA_pol3_delta2(2004.1.1.187)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930

Pfam Families

PF13177DNA_pol3_delta2

DNA polymerase III, delta subunit

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7TIB RCSB PDB: 7TIB PDBe: 7TIB

Downloads

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Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.