ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7xfwC1 - ECOD Domain | ECOD

ECOD/Domains/e7xfwC1

e7xfwC1

UID: 002874809

PDB

Range: C:6-171
PDB: 7XFW chain C(all domains)

Molecule: Peptidoglycan recognition protein 1

3D Structure

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Related Domains

Browse other domains in Amidase_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupN-acetylmuramoyl-L-alanine amidase-like(285)

HH-groupN-acetylmuramoyl-L-alanine amidase-like(285.1)

TT-groupN-acetylmuramoyl-L-alanine amidase-like(285.1.1)

FFamilyAmidase_2(285.1.1.1)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459
Hexanoic acid6NA

+ 3 additives (Acetate, Glycerin, 1,2-ETHANEDIOL)

Acetate

Pfam Families

PF01510Amidase_2

N-acetylmuramoyl-L-alanine amidase

External Links

ECOD PDB View: 7XFW RCSB PDB: 7XFW PDBe: 7XFW

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

GlycerinGOL

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.