ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ywtA1 - ECOD Domain | ECOD

ECOD/Domains/e6ywtA1

e6ywtA1

UID: 002874901

PDB

Range: A:224-479
PDB: 6YWT chain A(all domains)

Molecule: Uridine 5'-monophosphate synthase

3D Structure

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Related Domains

Browse other domains in OMPdecase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOMPdecase(2002.1.1.9)

Ligands

in contact, ≤ 4 Å

6-hydroxyuridine-5'-phosphateBMP
drugDrugBank DB02890
ProlinePRO
drugDrugBank DB00172

Shown in the structure viewer.

Pfam Families

PF00215OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6YWT RCSB PDB: 6YWT PDBe: 6YWT

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.