ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7z25A1 - ECOD Domain | ECOD

ECOD/Domains/e7z25A1

e7z25A1

UID: 002875112

PDB

Range: A:16-245
PDB: 7Z25 chain A(all domains)

Molecule: Serine protease 1

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
2-(5-bromanyl-7-fluoranyl-2-methyl-1H-indol-3-yl)ethanamineIAF

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 7Z25 RCSB PDB: 7Z25 PDBe: 7Z25

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.