ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8d16F2 - ECOD Domain | ECOD

ECOD/Domains/e8d16F2

e8d16F2

UID: 002876721

PDB

Range: F:140-375
PDB: 8D16 chain F(all domains)

Molecule: Actin, alpha skeletal muscle, intermediate form

3D Structure

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Related Domains

Browse other domains in Actin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyActin(2484.1.1.2)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Phosphate ion)

Pfam Families

Actin

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 8D16 RCSB PDB: 8D16 PDBe: 8D16

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.