ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8d5nC1 - ECOD Domain | ECOD

ECOD/Domains/e8d5nC1

e8d5nC1

UID: 002876925

PDB

Range: C:182-273
PDB: 8D5N chain C(all domains)

Molecule: H-2 class I histocompatibility antigen, L-D alpha chain

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, Tetraethylene glycol)

1,2-ETHANEDIOLEDO
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 8D5N RCSB PDB: 8D5N PDBe: 8D5N

Downloads

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