ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8djiA1 - ECOD Domain | ECOD

ECOD/Domains/e8djiA1

e8djiA1

UID: 002877632

PDB

Range: A:19-93
PDB: 8DJI chain A(all domains)

Molecule: Small ubiquitin-related modifier 1

3D Structure

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Related Domains

Browse other domains in Rad60-SLD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyRad60-SLD(221.1.1.44)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11976Rad60-SLD

Ubiquitin-2 like Rad60 SUMO-like

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 8DJI RCSB PDB: 8DJI PDBe: 8DJI

Downloads

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