ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7rvnA1 - ECOD Domain | ECOD

ECOD/Domains/e7rvnA1

e7rvnA1

UID: 002885985

PDB

Range: A:1-186
PDB: 7RVN chain A(all domains)

Molecule: 3C-like proteinase

3D Structure

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Related Domains

Browse other domains in Peptidase_C30 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_C30(1.1.5.19)

Ligands

in contact, ≤ 4 Å

N-[(benzyloxy)carbonyl]-L-valyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-4-methylidene-L-norvalinamide7VB

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF05409Peptidase_C30

Coronavirus endopeptidase C30

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 7RVN RCSB PDB: 7RVN PDBe: 7RVN

Downloads

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