ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7xxkF1 - ECOD Domain | ECOD

ECOD/Domains/e7xxkF1

e7xxkF1

UID: 002898097

PDB

Range: F:257-363
PDB: 7XXK chain F(all domains)

Molecule: Nucleoprotein

3D Structure

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Related Domains

Browse other domains in CoV_nucleocap →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupArterivirus nucleocapsid protein(808)

HH-groupArterivirus nucleocapsid protein(808.1)

TT-groupArterivirus nucleocapsid protein(808.1.1)

FFamilyCoV_nucleocap(808.1.1.1)

Ligands

in contact, ≤ 4 Å

GuanosineGMP
drugDrugBank DB02857
GuanineGUN
drugDrugBank DB02377
Chloride ion

Pfam Families

PF00937CoV_nucleocap

Coronavirus nucleocapsid

External Links

ECOD PDB View: 7XXK RCSB PDB: 7XXK PDBe: 7XXK

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Potassium ionK

metal

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.