ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7zm0D1 - ECOD Domain | ECOD

ECOD/Domains/e7zm0D1

e7zm0D1

UID: 002900552

PDB

Range: D:0-222
PDB: 7ZM0 chain D(all domains)

Molecule: Ubiquitin carboxyl-terminal hydrolase isozyme L1

3D Structure

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Related Domains

Browse other domains in Peptidase_C12 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C12(219.1.1.9)

Ligands

in contact, ≤ 4 Å

(3S)-1-(iminomethyl)-N-[1-[4-(pent-4-ynylcarbamoyl)phenyl]imidazol-4-yl]pyrrolidine-3-carboxamideJMF

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01088Peptidase_C12

Ubiquitin carboxyl-terminal hydrolase, family 1

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 7ZM0 RCSB PDB: 7ZM0 PDBe: 7ZM0

Downloads

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