ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7akdC2 - ECOD Domain | ECOD

ECOD/Domains/e7akdC2

e7akdC2

UID: 002905046

PDB

Range: C:695-827,C:855-1122
PDB: 7AKD chain C(all domains)

Molecule: Spike glycoprotein

3D Structure

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Related Domains

Browse other domains in CoV_S2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupS2 subunit of coronavirus spike glycoprotein(1042)

HH-groupS2 subunit of coronavirus spike glycoprotein(1042.1)

TT-groupS2 subunit of coronavirus spike glycoprotein(1042.1.1)

FFamilyCoV_S2(1042.1.1.1)

Ligands

in contact, ≤ 4 Å

alpha-L-fucoseFUC
drugDrugBank DB04473
N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer.

Pfam Families

Coronavirus spike glycoprotein S2

ClanCL0595Fusion_gly

External Links

ECOD PDB View: 7AKD RCSB PDB: 7AKD PDBe: 7AKD

Downloads

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Drug annotations from DrugDomain.