ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8aj6A1 - ECOD Domain | ECOD

ECOD/Domains/e8aj6A1

e8aj6A1

UID: 002981102

PDB

Range: A:210-511
PDB: 8AJ6 chain A(all domains)

Molecule: Iron hydrogenase 1

3D Structure

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Related Domains

Browse other domains in Fe_hyd_lg_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFe-only hydrogenase(7556)

HH-groupFe-only hydrogenase(7556.1)

TT-groupFe-only hydrogenase(7556.1.1)

FFamilyFe_hyd_lg_C(7556.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Iron/sulfur clusterSF4
Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, cyanide cluster (-CN form)VHR

+ 1 additive (Glycerin)

Pfam Families

PF02906Fe_hyd_lg_C

Iron only hydrogenase large subunit, C-terminal domain

External Links

ECOD PDB View: 8AJ6 RCSB PDB: 8AJ6 PDBe: 8AJ6

Downloads

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GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.